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1.
Chaos ; 34(4)2024 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-38639569

RESUMO

Dynamical balance of excitation and inhibition is usually invoked to explain the irregular low firing activity observed in the cortex. We propose a robust nonlinear balancing mechanism for a random network of spiking neurons, which works also in the absence of strong external currents. Biologically, the mechanism exploits the plasticity of excitatory-excitatory synapses induced by short-term depression. Mathematically, the nonlinear response of the synaptic activity is the key ingredient responsible for the emergence of a stable balanced regime. Our claim is supported by a simple self-consistent analysis accompanied by extensive simulations performed for increasing network sizes. The observed regime is essentially fluctuation driven and characterized by highly irregular spiking dynamics of all neurons.


Assuntos
Modelos Neurológicos , Redes Neurais de Computação , Potenciais de Ação/fisiologia , Neurônios/fisiologia , Sinapses/fisiologia , Plasticidade Neuronal/fisiologia
2.
J Neural Eng ; 21(2)2024 Apr 25.
Artigo em Inglês | MEDLINE | ID: mdl-38621378

RESUMO

Objective: Epilepsy is a complex disease spanning across multiple scales, from ion channels in neurons to neuronal circuits across the entire brain. Over the past decades, computational models have been used to describe the pathophysiological activity of the epileptic brain from different aspects. Traditionally, each computational model can aid in optimizing therapeutic interventions, therefore, providing a particular view to design strategies for treating epilepsy. As a result, most studies are concerned with generating specific models of the epileptic brain that can help us understand the certain machinery of the pathological state. Those specific models vary in complexity and biological accuracy, with system-level models often lacking biological details.Approach: Here, we review various types of computational model of epilepsy and discuss their potential for different therapeutic approaches and scenarios, including drug discovery, surgical strategies, brain stimulation, and seizure prediction. We propose that we need to consider an integrated approach with a unified modelling framework across multiple scales to understand the epileptic brain. Our proposal is based on the recent increase in computational power, which has opened up the possibility of unifying those specific epileptic models into simulations with an unprecedented level of detail.Main results: A multi-scale epilepsy model can bridge the gap between biologically detailed models, used to address molecular and cellular questions, and brain-wide models based on abstract models which can account for complex neurological and behavioural observations.Significance: With these efforts, we move toward the next generation of epileptic brain models capable of connecting cellular features, such as ion channel properties, with standard clinical measures such as seizure severity.


Assuntos
Encéfalo , Simulação por Computador , Epilepsia , Modelos Neurológicos , Humanos , Epilepsia/fisiopatologia , Epilepsia/terapia , Encéfalo/fisiopatologia , Animais , Rede Nervosa/fisiopatologia
3.
J Comput Neurosci ; 52(2): 133-144, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38581476

RESUMO

Spatial navigation through novel spaces and to known goal locations recruits multiple integrated structures in the mammalian brain. Within this extended network, the hippocampus enables formation and retrieval of cognitive spatial maps and contributes to decision making at choice points. Exploration and navigation to known goal locations produce synchronous activity of hippocampal neurons resulting in rhythmic oscillation events in local networks. Power of specific oscillatory frequencies and numbers of these events recorded in local field potentials correlate with distinct cognitive aspects of spatial navigation. Typically, oscillatory power in brain circuits is analyzed with Fourier transforms or short-time Fourier methods, which involve assumptions about the signal that are likely not true and fail to succinctly capture potentially informative features. To avoid such assumptions, we applied a method that combines manifold discovery techniques with dynamical systems theory, namely diffusion maps and Takens' time-delay embedding theory, that avoids limitations seen in traditional methods. This method, called diffusion mapped delay coordinates (DMDC), when applied to hippocampal signals recorded from juvenile rats freely navigating a Y-maze, replicates some outcomes seen with standard approaches and identifies age differences in dynamic states that traditional analyses are unable to detect. Thus, DMDC may serve as a suitable complement to more traditional analyses of LFPs recorded from behaving subjects that may enhance information yield.


Assuntos
Hipocampo , Animais , Hipocampo/fisiologia , Masculino , Ratos , Ratos Long-Evans , Neurônios/fisiologia , Navegação Espacial/fisiologia , Aprendizagem em Labirinto/fisiologia , Modelos Neurológicos , Potenciais de Ação/fisiologia
4.
PLoS Comput Biol ; 20(4): e1011183, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38557984

RESUMO

One of the key problems the brain faces is inferring the state of the world from a sequence of dynamically changing stimuli, and it is not yet clear how the sensory system achieves this task. A well-established computational framework for describing perceptual processes in the brain is provided by the theory of predictive coding. Although the original proposals of predictive coding have discussed temporal prediction, later work developing this theory mostly focused on static stimuli, and key questions on neural implementation and computational properties of temporal predictive coding networks remain open. Here, we address these questions and present a formulation of the temporal predictive coding model that can be naturally implemented in recurrent networks, in which activity dynamics rely only on local inputs to the neurons, and learning only utilises local Hebbian plasticity. Additionally, we show that temporal predictive coding networks can approximate the performance of the Kalman filter in predicting behaviour of linear systems, and behave as a variant of a Kalman filter which does not track its own subjective posterior variance. Importantly, temporal predictive coding networks can achieve similar accuracy as the Kalman filter without performing complex mathematical operations, but just employing simple computations that can be implemented by biological networks. Moreover, when trained with natural dynamic inputs, we found that temporal predictive coding can produce Gabor-like, motion-sensitive receptive fields resembling those observed in real neurons in visual areas. In addition, we demonstrate how the model can be effectively generalized to nonlinear systems. Overall, models presented in this paper show how biologically plausible circuits can predict future stimuli and may guide research on understanding specific neural circuits in brain areas involved in temporal prediction.


Assuntos
Encéfalo , Modelos Neurológicos , Encéfalo/fisiologia , Aprendizagem , Neurônios/fisiologia
5.
Elife ; 122024 Apr 24.
Artigo em Inglês | MEDLINE | ID: mdl-38656279

RESUMO

The central tendency bias, or contraction bias, is a phenomenon where the judgment of the magnitude of items held in working memory appears to be biased toward the average of past observations. It is assumed to be an optimal strategy by the brain and commonly thought of as an expression of the brain's ability to learn the statistical structure of sensory input. On the other hand, recency biases such as serial dependence are also commonly observed and are thought to reflect the content of working memory. Recent results from an auditory delayed comparison task in rats suggest that both biases may be more related than previously thought: when the posterior parietal cortex (PPC) was silenced, both short-term and contraction biases were reduced. By proposing a model of the circuit that may be involved in generating the behavior, we show that a volatile working memory content susceptible to shifting to the past sensory experience - producing short-term sensory history biases - naturally leads to contraction bias. The errors, occurring at the level of individual trials, are sampled from the full distribution of the stimuli and are not due to a gradual shift of the memory toward the sensory distribution's mean. Our results are consistent with a broad set of behavioral findings and provide predictions of performance across different stimulus distributions and timings, delay intervals, as well as neuronal dynamics in putative working memory areas. Finally, we validate our model by performing a set of human psychophysics experiments of an auditory parametric working memory task.


During cognitive tasks, our brain needs to temporarily hold and manipulate the information it is processing to decide how best to respond. This ability, known as working memory, is influenced by how the brain represents and processes the sensory world around us, which can lead to biases, such as 'central tendency'. Consider an experiment where you are presented with a metal bar and asked to recall how long it was after a few seconds. Typically, our memories, averaged over many trials of repeating this memory recall test, appear to skew towards an average length, leading to the tendency to mis-remember the bar as being shorter or longer than it actually was. This central tendency occurs in most species, and is thought to be the result of the brain learning which sensory input is the most likely to occur out of the range of possibilities. Working memory is also influenced by short-term history or recency bias, where a recent past experience influences a current memory. Studies have shown that 'turning off' a region of the rat brain called the posterior parietal cortex removes the effects of both recency bias and central tendency on working memory. Here, Boboeva et al. reveal that these two biases, which were thought to be controlled by separate mechanisms, may in fact be related. Building on the inactivation study, the team modelled a circuit of neurons that can give rise to the results observed in the rat experiments, as well as behavioural results in humans and primates. The computational model contained two modules: one of which represented a putative working memory, and another which represented the posterior parietal cortex which relays sensory information about past experiences. Boboeva et al. found that sensory inputs relayed from the posterior parietal cortex module led to recency biases in working memory. As a result, central tendency naturally emerged without needing to add assumptions to the model about which sensory input is the most likely to occur. The computational model was also able to replicate all known previous experimental findings, and made some predictions that were tested and confirmed by psychophysics tests on human participants. The findings of Boboeva et al. provide a new potential mechanism for how central tendency emerges in working memory. The model suggests that to achieve central tendency prior knowledge of how a sensory stimulus is distributed in an environment is not required, as it naturally emerges due to a volatile working memory which is susceptible to errors. This is the first mechanistic model to unify these two sources of bias in working memory. In the future, this could help advance our understanding of certain psychiatric conditions in which working memory and sensory learning are impaired.


Assuntos
Memória de Curto Prazo , Memória de Curto Prazo/fisiologia , Animais , Humanos , Ratos , Modelos Neurológicos , Lobo Parietal/fisiologia
6.
Proc Natl Acad Sci U S A ; 121(18): e2322550121, 2024 Apr 30.
Artigo em Inglês | MEDLINE | ID: mdl-38657053

RESUMO

Pronounced differences in neurotransmitter release from a given presynaptic neuron, depending on the synaptic target, are among the most intriguing features of cortical networks. Hippocampal pyramidal cells (PCs) release glutamate with low probability to somatostatin expressing oriens-lacunosum-moleculare (O-LM) interneurons (INs), and the postsynaptic responses show robust short-term facilitation, whereas the release from the same presynaptic axons onto fast-spiking INs (FSINs) is ~10-fold higher and the excitatory postsynaptic currents (EPSCs) display depression. The mechanisms underlying these vastly different synaptic behaviors have not been conclusively identified. Here, we applied a combined functional, pharmacological, and modeling approach to address whether the main difference lies in the action potential-evoked fusion or else in upstream priming processes of synaptic vesicles (SVs). A sequential two-step SV priming model was fitted to the peak amplitudes of unitary EPSCs recorded in response to complex trains of presynaptic stimuli in acute hippocampal slices of adult mice. At PC-FSIN connections, the fusion probability (Pfusion) of well-primed SVs is 0.6, and 44% of docked SVs are in a fusion-competent state. At PC-O-LM synapses, Pfusion is only 40% lower (0.36), whereas the fraction of well-primed SVs is 6.5-fold smaller. Pharmacological enhancement of fusion by 4-AP and priming by PDBU was recaptured by the model with a selective increase of Pfusion and the fraction of well-primed SVs, respectively. Our results demonstrate that the low fidelity of transmission at PC-O-LM synapses can be explained by a low occupancy of the release sites by well-primed SVs.


Assuntos
Neurotransmissores , Vesículas Sinápticas , Animais , Vesículas Sinápticas/metabolismo , Vesículas Sinápticas/fisiologia , Camundongos , Neurotransmissores/metabolismo , Hipocampo/metabolismo , Hipocampo/fisiologia , Potenciais Pós-Sinápticos Excitadores/fisiologia , Transmissão Sináptica/fisiologia , Interneurônios/metabolismo , Interneurônios/fisiologia , Células Piramidais/metabolismo , Células Piramidais/fisiologia , Sinapses/metabolismo , Sinapses/fisiologia , Modelos Neurológicos
7.
J Comput Neurosci ; 52(2): 145-164, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38607466

RESUMO

Traveling waves of neural activity emerge in cortical networks both spontaneously and in response to stimuli. The spatiotemporal structure of waves can indicate the information they encode and the physiological processes that sustain them. Here, we investigate the stimulus-response relationships of traveling waves emerging in adaptive neural fields as a model of visual motion processing. Neural field equations model the activity of cortical tissue as a continuum excitable medium, and adaptive processes provide negative feedback, generating localized activity patterns. Synaptic connectivity in our model is described by an integral kernel that weakens dynamically due to activity-dependent synaptic depression, leading to marginally stable traveling fronts (with attenuated backs) or pulses of a fixed speed. Our analysis quantifies how weak stimuli shift the relative position of these waves over time, characterized by a wave response function we obtain perturbatively. Persistent and continuously visible stimuli model moving visual objects. Intermittent flashes that hop across visual space can produce the experience of smooth apparent visual motion. Entrainment of waves to both kinds of moving stimuli are well characterized by our theory and numerical simulations, providing a mechanistic description of the perception of visual motion.


Assuntos
Modelos Neurológicos , Percepção de Movimento , Estimulação Luminosa , Percepção de Movimento/fisiologia , Humanos , Neurônios/fisiologia , Animais , Simulação por Computador , Córtex Visual/fisiologia , Adaptação Fisiológica/fisiologia
8.
Nat Commun ; 15(1): 3403, 2024 Apr 22.
Artigo em Inglês | MEDLINE | ID: mdl-38649683

RESUMO

The corpus callosum, historically considered primarily for homotopic connections, supports many heterotopic connections, indicating complex interhemispheric connectivity. Understanding this complexity is crucial yet challenging due to diverse cell-specific wiring patterns. Here, we utilized public AAV bulk tracing and single-neuron tracing data to delineate the anatomical connection patterns of mouse brains and conducted wide-field calcium imaging to assess functional connectivity across various brain states in male mice. The single-neuron data uncovered complex and dense interconnected patterns, particularly for interhemispheric-heterotopic connections. We proposed a metric "heterogeneity" to quantify the complexity of the connection patterns. Computational modeling of these patterns suggested that the heterogeneity of upstream projections impacted downstream homotopic functional connectivity. Furthermore, higher heterogeneity observed in interhemispheric-heterotopic projections would cause lower strength but higher stability in functional connectivity than their intrahemispheric counterparts. These findings were corroborated by our wide-field functional imaging data, underscoring the important role of heterotopic-projection heterogeneity in interhemispheric communication.


Assuntos
Corpo Caloso , Neurônios , Animais , Corpo Caloso/fisiologia , Masculino , Camundongos , Neurônios/fisiologia , Vias Neurais/fisiologia , Conectoma , Encéfalo/fisiologia , Simulação por Computador , Modelos Neurológicos , Rede Nervosa/fisiologia , Cálcio/metabolismo
9.
PLoS Comput Biol ; 20(4): e1011951, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38598603

RESUMO

Implicit adaptation has been regarded as a rigid process that automatically operates in response to movement errors to keep the sensorimotor system precisely calibrated. This hypothesis has been challenged by recent evidence suggesting flexibility in this learning process. One compelling line of evidence comes from work suggesting that this form of learning is context-dependent, with the rate of learning modulated by error history. Specifically, learning was attenuated in the presence of perturbations exhibiting high variance compared to when the perturbation is fixed. However, these findings are confounded by the fact that the adaptation system corrects for errors of different magnitudes in a non-linear manner, with the adaptive response increasing in a proportional manner to small errors and saturating to large errors. Through simulations, we show that this non-linear motor correction function is sufficient to explain the effect of perturbation variance without referring to an experience-dependent change in error sensitivity. Moreover, by controlling the distribution of errors experienced during training, we provide empirical evidence showing that there is no measurable effect of perturbation variance on implicit adaptation. As such, we argue that the evidence to date remains consistent with the rigidity assumption.


Assuntos
Adaptação Fisiológica , Humanos , Adaptação Fisiológica/fisiologia , Simulação por Computador , Aprendizagem/fisiologia , Desempenho Psicomotor/fisiologia , Biologia Computacional , Movimento/fisiologia , Masculino , Adulto , Modelos Neurológicos
10.
Neural Comput ; 36(5): 803-857, 2024 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-38658028

RESUMO

Deep feedforward and recurrent neural networks have become successful functional models of the brain, but they neglect obvious biological details such as spikes and Dale's law. Here we argue that these details are crucial in order to understand how real neural circuits operate. Towards this aim, we put forth a new framework for spike-based computation in low-rank excitatory-inhibitory spiking networks. By considering populations with rank-1 connectivity, we cast each neuron's spiking threshold as a boundary in a low-dimensional input-output space. We then show how the combined thresholds of a population of inhibitory neurons form a stable boundary in this space, and those of a population of excitatory neurons form an unstable boundary. Combining the two boundaries results in a rank-2 excitatory-inhibitory (EI) network with inhibition-stabilized dynamics at the intersection of the two boundaries. The computation of the resulting networks can be understood as the difference of two convex functions and is thereby capable of approximating arbitrary non-linear input-output mappings. We demonstrate several properties of these networks, including noise suppression and amplification, irregular activity and synaptic balance, as well as how they relate to rate network dynamics in the limit that the boundary becomes soft. Finally, while our work focuses on small networks (5-50 neurons), we discuss potential avenues for scaling up to much larger networks. Overall, our work proposes a new perspective on spiking networks that may serve as a starting point for a mechanistic understanding of biological spike-based computation.


Assuntos
Potenciais de Ação , Modelos Neurológicos , Inibição Neural , Redes Neurais de Computação , Neurônios , Dinâmica não Linear , Potenciais de Ação/fisiologia , Neurônios/fisiologia , Inibição Neural/fisiologia , Humanos , Animais , Rede Nervosa/fisiologia , Sinapses/fisiologia , Simulação por Computador
11.
Neural Comput ; 36(5): 759-780, 2024 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-38658025

RESUMO

Central pattern generators are circuits generating rhythmic movements, such as walking. The majority of existing computational models of these circuits produce antagonistic output where all neurons within a population spike with a broad burst at about the same neuronal phase with respect to network output. However, experimental recordings reveal that many neurons within these circuits fire sparsely, sometimes as rarely as once within a cycle. Here we address the sparse neuronal firing and develop a model to replicate the behavior of individual neurons within rhythm-generating populations to increase biological plausibility and facilitate new insights into the underlying mechanisms of rhythm generation. The developed network architecture is able to produce sparse firing of individual neurons, creating a novel implementation for exploring the contribution of network architecture on rhythmic output. Furthermore, the introduction of sparse firing of individual neurons within the rhythm-generating circuits is one of the factors that allows for a broad neuronal phase representation of firing at the population level. This moves the model toward recent experimental findings of evenly distributed neuronal firing across phases among individual spinal neurons. The network is tested by methodically iterating select parameters to gain an understanding of how connectivity and the interplay of excitation and inhibition influence the output. This knowledge can be applied in future studies to implement a biologically plausible rhythm-generating circuit for testing biological hypotheses.


Assuntos
Potenciais de Ação , Geradores de Padrão Central , Modelos Neurológicos , Medula Espinal , Potenciais de Ação/fisiologia , Geradores de Padrão Central/fisiologia , Animais , Medula Espinal/fisiologia , Neurônios/fisiologia , Simulação por Computador , Redes Neurais de Computação , Periodicidade , Rede Nervosa/fisiologia , Humanos
12.
Neural Comput ; 36(5): 1022-1040, 2024 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-38658026

RESUMO

A key question in the neuroscience of memory encoding pertains to the mechanisms by which afferent stimuli are allocated within memory networks. This issue is especially pronounced in the domain of working memory, where capacity is finite. Presumably the brain must embed some "policy" by which to allocate these mnemonic resources in an online manner in order to maximally represent and store afferent information for as long as possible and without interference from subsequent stimuli. Here, we engage this question through a top-down theoretical modeling framework. We formally optimize a gating mechanism that projects afferent stimuli onto a finite number of memory slots within a recurrent network architecture. In the absence of external input, the activity in each slot attenuates over time (i.e., a process of gradual forgetting). It turns out that the optimal gating policy consists of a direct projection from sensory activity to memory slots, alongside an activity-dependent lateral inhibition. Interestingly, allocating resources myopically (greedily with respect to the current stimulus) leads to efficient utilization of slots over time. In other words, later-arriving stimuli are distributed across slots in such a way that the network state is minimally shifted and so prior signals are minimally "overwritten." Further, networks with heterogeneity in the timescales of their forgetting rates retain stimuli better than those that are more homogeneous. Our results suggest how online, recurrent networks working on temporally localized objectives without high-level supervision can nonetheless implement efficient allocation of memory resources over time.


Assuntos
Redes Neurais de Computação , Humanos , Modelos Neurológicos , Memória de Curto Prazo/fisiologia , Encéfalo/fisiologia , Memória/fisiologia
13.
Neural Comput ; 36(5): 781-802, 2024 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-38658027

RESUMO

Variation in the strength of synapses can be quantified by measuring the anatomical properties of synapses. Quantifying precision of synaptic plasticity is fundamental to understanding information storage and retrieval in neural circuits. Synapses from the same axon onto the same dendrite have a common history of coactivation, making them ideal candidates for determining the precision of synaptic plasticity based on the similarity of their physical dimensions. Here, the precision and amount of information stored in synapse dimensions were quantified with Shannon information theory, expanding prior analysis that used signal detection theory (Bartol et al., 2015). The two methods were compared using dendritic spine head volumes in the middle of the stratum radiatum of hippocampal area CA1 as well-defined measures of synaptic strength. Information theory delineated the number of distinguishable synaptic strengths based on nonoverlapping bins of dendritic spine head volumes. Shannon entropy was applied to measure synaptic information storage capacity (SISC) and resulted in a lower bound of 4.1 bits and upper bound of 4.59 bits of information based on 24 distinguishable sizes. We further compared the distribution of distinguishable sizes and a uniform distribution using Kullback-Leibler divergence and discovered that there was a nearly uniform distribution of spine head volumes across the sizes, suggesting optimal use of the distinguishable values. Thus, SISC provides a new analytical measure that can be generalized to probe synaptic strengths and capacity for plasticity in different brain regions of different species and among animals raised in different conditions or during learning. How brain diseases and disorders affect the precision of synaptic plasticity can also be probed.


Assuntos
Teoria da Informação , Plasticidade Neuronal , Sinapses , Animais , Sinapses/fisiologia , Plasticidade Neuronal/fisiologia , Espinhas Dendríticas/fisiologia , Região CA1 Hipocampal/fisiologia , Modelos Neurológicos , Armazenamento e Recuperação da Informação , Masculino , Hipocampo/fisiologia , Ratos
14.
eNeuro ; 11(3)2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-38471777

RESUMO

Synchronization in the gamma band (25-150 Hz) is mediated by PV+ inhibitory interneurons, and evidence is accumulating for the essential role of gamma oscillations in cognition. Oscillations can arise in inhibitory networks via synaptic interactions between individual oscillatory neurons (mean-driven) or via strong recurrent inhibition that destabilizes the stationary background firing rate in the fluctuation-driven balanced state, causing an oscillation in the population firing rate. Previous theoretical work focused on model neurons with Hodgkin's Type 1 excitability (integrators) connected by current-based synapses. Here we show that networks comprised of simple Type 2 oscillators (resonators) exhibit a supercritical Hopf bifurcation between synchrony and asynchrony and a gradual transition via cycle skipping from coupled oscillators to stochastic population oscillator (SPO), as previously shown for Type 1. We extended our analysis to homogeneous networks with conductance rather than current based synapses and found that networks with hyperpolarizing inhibitory synapses were more robust to noise than those with shunting synapses, both in the coupled oscillator and SPO regime. Assuming that reversal potentials are uniformly distributed between shunting and hyperpolarized values, as observed in one experimental study, converting synapses to purely hyperpolarizing favored synchrony in all cases, whereas conversion to purely shunting synapses made synchrony less robust except at very high conductance strengths. In mature neurons the synaptic reversal potential is controlled by chloride cotransporters that control the intracellular concentrations of chloride and bicarbonate ions, suggesting these transporters as a potential therapeutic target to enhance gamma synchrony and cognition.


Assuntos
Cloretos , Transmissão Sináptica , Transmissão Sináptica/fisiologia , Simulação por Computador , Interneurônios/fisiologia , Sinapses/fisiologia , Potenciais de Ação/fisiologia , Modelos Neurológicos
15.
Elife ; 122024 Mar 28.
Artigo em Inglês | MEDLINE | ID: mdl-38546203

RESUMO

Grid firing fields have been proposed as a neural substrate for spatial localisation in general or for path integration in particular. To distinguish these possibilities, we investigate firing of grid and non-grid cells in the mouse medial entorhinal cortex during a location memory task. We find that grid firing can either be anchored to the task environment, or can encode distance travelled independently of the task reference frame. Anchoring varied between and within sessions, while spatial firing of non-grid cells was either coherent with the grid population, or was stably anchored to the task environment. We took advantage of the variability in task-anchoring to evaluate whether and when encoding of location by grid cells might contribute to behaviour. We find that when reward location is indicated by a visual cue, performance is similar regardless of whether grid cells are task-anchored or not, arguing against a role for grid representations when location cues are available. By contrast, in the absence of the visual cue, performance was enhanced when grid cells were anchored to the task environment. Our results suggest that anchoring of grid cells to task reference frames selectively enhances performance when path integration is required.


Assuntos
Sinais (Psicologia) , Córtex Entorrinal , Camundongos , Animais , Potenciais de Ação , Percepção Espacial , Modelos Neurológicos
16.
PLoS Comput Biol ; 20(3): e1011848, 2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-38489379

RESUMO

The recent advancements in large-scale activity imaging of neuronal ensembles offer valuable opportunities to comprehend the process involved in generating brain activity patterns and understanding how information is transmitted between neurons or neuronal ensembles. However, existing methodologies for extracting the underlying properties that generate overall dynamics are still limited. In this study, we applied previously unexplored methodologies to analyze time-lapse 3D imaging (4D imaging) data of head neurons of the nematode Caenorhabditis elegans. By combining time-delay embedding with the independent component analysis, we successfully decomposed whole-brain activities into a small number of component dynamics. Through the integration of results from multiple samples, we extracted common dynamics from neuronal activities that exhibit apparent divergence across different animals. Notably, while several components show common cooperativity across samples, some component pairs exhibited distinct relationships between individual samples. We further developed time series prediction models of synaptic communications. By combining dimension reduction using the general framework, gradient kernel dimension reduction, and probabilistic modeling, the overall relationships of neural activities were incorporated. By this approach, the stochastic but coordinated dynamics were reproduced in the simulated whole-brain neural network. We found that noise in the nervous system is crucial for generating realistic whole-brain dynamics. Furthermore, by evaluating synaptic interaction properties in the models, strong interactions within the core neural circuit, variable sensory transmission and importance of gap junctions were inferred. Virtual optogenetics can be also performed using the model. These analyses provide a solid foundation for understanding information flow in real neural networks.


Assuntos
Fenômenos Fisiológicos do Sistema Nervoso , Neurônios , Animais , Neurônios/fisiologia , Encéfalo/diagnóstico por imagem , Junções Comunicantes/fisiologia , Caenorhabditis elegans/fisiologia , Neuroimagem , Modelos Neurológicos
17.
Phys Rev E ; 109(2-1): 024406, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38491595

RESUMO

The construction of transfer functions in theoretical neuroscience plays an important role in determining the spiking rate behavior of neurons in networks. These functions can be obtained through various fitting methods, but the biological relevance of the parameters is not always clear. However, for stationary inputs, such functions can be obtained without the adjustment of free parameters by using mean-field methods. In this work, we expand current Fokker-Planck approaches to account for the concurrent influence of colored and multiplicative noise terms on generic conductance-based integrate-and-fire neurons. We reduce the resulting stochastic system through the application of the diffusion approximation to a one-dimensional Langevin equation. An effective Fokker-Planck is then constructed using Fox Theory, which is solved numerically using a newly developed double integration procedure to obtain the transfer function and the membrane potential distribution. The solution is capable of reproducing the transfer function and the stationary voltage distribution of simulated neurons across a wide range of parameters. The method can also be easily extended to account for different sources of noise with various multiplicative terms, and it can be used in other types of problems in principle.


Assuntos
Modelos Neurológicos , Neurônios , Neurônios/fisiologia , Potenciais da Membrana , Potenciais de Ação/fisiologia
18.
Phys Rev E ; 109(2-1): 024407, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38491664

RESUMO

The steady-state firing rate and firing-rate response of the leaky and exponential integrate-and-fire models receiving synaptic shot noise with excitatory and inhibitory reversal potentials is examined. For the particular case where the underlying synaptic conductances are exponentially distributed, it is shown that the master equation for a population of such model neurons can be reduced from an integrodifferential form to a more tractable set of three differential equations. The system is nevertheless more challenging analytically than for current-based synapses: where possible, analytical results are provided with an efficient numerical scheme and code provided for other quantities. The increased tractability of the framework developed supports an ongoing critical comparison between models in which synapses are treated with and without reversal potentials, such as recently in the context of networks with balanced excitatory and inhibitory conductances.


Assuntos
Modelos Neurológicos , Neurônios , Potenciais de Ação/fisiologia , Neurônios/fisiologia , Sinapses/fisiologia , Ruído , Simulação por Computador
19.
Phys Rev E ; 109(2-1): 024302, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38491696

RESUMO

The space of possible behaviors that complex biological systems may exhibit is unimaginably vast, and these systems often appear to be stochastic, whether due to variable noisy environmental inputs or intrinsically generated chaos. The brain is a prominent example of a biological system with complex behaviors. The number of possible patterns of spikes emitted by a local brain circuit is combinatorially large, although the brain may not make use of all of them. Understanding which of these possible patterns are actually used by the brain, and how those sets of patterns change as properties of neural circuitry change is a major goal in neuroscience. Recently, tools from information geometry have been used to study embeddings of probabilistic models onto a hierarchy of model manifolds that encode how model outputs change as a function of their parameters, giving a quantitative notion of "distances" between outputs. We apply this method to a network model of excitatory and inhibitory neural populations to understand how the competition between membrane and synaptic response timescales shapes the network's information geometry. The hyperbolic embedding allows us to identify the statistical parameters to which the model behavior is most sensitive, and demonstrate how the ranking of these coordinates changes with the balance of excitation and inhibition in the network.


Assuntos
Encéfalo , Redes Neurais de Computação , Encéfalo/fisiologia , Modelos Estatísticos , Modelos Neurológicos , Inibição Neural/fisiologia
20.
PLoS Comput Biol ; 20(3): e1011874, 2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-38437226

RESUMO

The biophysical properties of neurons not only affect how information is processed within cells, they can also impact the dynamical states of the network. Specifically, the cellular dynamics of action-potential generation have shown relevance for setting the (de)synchronisation state of the network. The dynamics of tonically spiking neurons typically fall into one of three qualitatively distinct types that arise from distinct mathematical bifurcations of voltage dynamics at the onset of spiking. Accordingly, changes in ion channel composition or even external factors, like temperature, have been demonstrated to switch network behaviour via changes in the spike onset bifurcation and hence its associated dynamical type. A thus far less addressed modulator of neuronal dynamics is cellular morphology. Based on simplified and anatomically realistic mathematical neuron models, we show here that the extent of dendritic arborisation has an influence on the neuronal dynamical spiking type and therefore on the (de)synchronisation state of the network. Specifically, larger dendritic trees prime neuronal dynamics for in-phase-synchronised or splayed-out activity in weakly coupled networks, in contrast to cells with otherwise identical properties yet smaller dendrites. Our biophysical insights hold for generic multicompartmental classes of spiking neuron models (from ball-and-stick-type to anatomically reconstructed models) and establish a connection between neuronal morphology and the susceptibility of neural tissue to synchronisation in health and disease.


Assuntos
Modelos Neurológicos , Neurônios , Neurônios/fisiologia , Potenciais de Ação/fisiologia , Canais Iônicos/fisiologia , Biofísica
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